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The time now is Mon 18 Jan 2021, 22:37
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 Forum index » Advanced Topics » Additional Software (PETs, n' stuff) » REQUESTS
Need a .pet to start simulations of COVID-19 proteins.
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ethplorer

Joined: 21 Apr 2017
Posts: 28

PostPosted: Wed 25 Mar 2020, 08:44    Post subject:  Need a .pet to start simulations of COVID-19 proteins.  

I tried installing the deb file here but its not working in both tahrpup and BionicPup. So i'm requesting that maybe you guys can also help create a pet package for it.


https://foldingathome.org/start-folding/

Last edited by ethplorer on Wed 25 Mar 2020, 09:06; edited 1 time in total
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rcrsn51


Joined: 05 Sep 2006
Posts: 13129
Location: Stratford, Ontario

PostPosted: Wed 25 Mar 2020, 08:45    Post subject:  

What deb file? Details please.
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ethplorer

Joined: 21 Apr 2017
Posts: 28

PostPosted: Wed 25 Mar 2020, 09:06    Post subject:  

rcrsn51 wrote:
What deb file? Details please.


updated the link. https://foldingathome.org/start-folding/
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bigpup


Joined: 11 Oct 2009
Posts: 13981
Location: S.C. USA

PostPosted: Wed 25 Mar 2020, 10:18    Post subject:  

Quote:
not working in both tahrpup and BionicPup

Are these the 32bit versions?
The deb says it is 32bit software.

Or

64 bit versions with their 32 bit compatibility sfs loaded?

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fredx181


Joined: 11 Dec 2013
Posts: 4481
Location: holland

PostPosted: Wed 25 Mar 2020, 12:45    Post subject:  

It's a python based progam, so is for 32-bit and 64-bit, to make it work install besides the .deb also python3.6 from PPM. EDIT: No, install python-gtk2 from PPM (not sure if it's enough, it may have other dependencies for the program to run properly).

Fred

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Keef


Joined: 20 Dec 2007
Posts: 1001
Location: Staffordshire

PostPosted: Fri 27 Mar 2020, 18:13    Post subject:  

How did you try to start it?
The binaries start with capitals eg FAHClient (which is the main one you need to run I think).

I got it running on FatDog by combining the debs and making an SFS. First though I had manually installed them, and had to mess about with the python libs as 'fah' was not being found. Never got my head round python, so not entirely sure what I did (or what was really needed). Will have to try it with no savefolder to check properly, but maybe later. I always have the devx loaded as well.

Anyway it runs:
FAH3.jpg
 Description   
 Filesize   91.74 KB
 Viewed   149 Time(s)

FAH3.jpg

FAH2.jpg
 Description   
 Filesize   96.99 KB
 Viewed   156 Time(s)

FAH2.jpg

FAH1.jpg
 Description   
 Filesize   66.77 KB
 Viewed   155 Time(s)

FAH1.jpg

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Keef


Joined: 20 Dec 2007
Posts: 1001
Location: Staffordshire

PostPosted: Sat 28 Mar 2020, 14:05    Post subject:  

My SFS attempt turned out to be waste of space. It was basically running off stuff I had forgotten to remove first, and failed to load again properly after I removed the offending bits.

Re-installed the 3 debs after converting to FatDog format. The viewer did fail though, so installed it manually.
I then had to move the contents of /usr/lib/python2.7/dist-packages/ (two directories) to:
/usr/lib64/python-2.7/site-packages/

All up and running again now.
It puts all its config and log files etc into root.
I am missing libcuda.so and libOpenCL (which make use of the GPU I believe) but this is not critical.
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